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Item Supplemental Data for "Frequency and Characterisation of Anomalies and Fractures of the Caudal Spine in Sheep with Undocked Tails"(2023-04-20) Hümmelchen, HannahThe dataset provided relates to the publication "Frequency and Characterisation of Anomalies and Fractures of the Caudal Spine in Sheep with Undocked Tails" in the journal Animals and is intended to increase the transparency of the data processes and allow reproducibility and traceability. At 14 weeks of age, the caudal spines of 216 undocked Merino land lambs was radiographically examined, and tail length and circumference were measured. Anomalies were documented and statistical correlation and model calculations were performed using the statistical programme SAS OnDemand for Academics (SAS, 2022). - The lamb ID represents a continuous numbering of the examined animals for targeted assignment. - Litter size is used to describe the number of lambs in this litter. - Sex can be female (w) or male (m). - We used 4 different rams (male sheep) for the mating. Ram 1 and 2 are short tailed, Ram 3 and 4 have a long tail. Therefore the number of the ram (1-4) is documented. - The parity describes the number of previous lamings of the ewe. - Tail length and tail circumference are displayed in centimeters. - The Number of vertebrae was counted on the basis of an X-ray image. - The occurence of axial deviation, blocked vertebrae, wedged vertebrae and vertebral fractures coded with 1. If no change was found, it was coded as 0. - The fracture localisation can be 1 = Caudal third of the tail, 2 = middle third of the tail, 12 = caudal and middle third of the tail or 0 = no fracture - Axial deviation was defined as any manually irreparable deviation of the tail from the medians. - A blocked vertebra was considered present if the vertebral boundaries of adjacent vertebrae were not clearly visible or were completely fused. Wedge-shaped bony structures present between two vertebrae were recorded as wedged vertebrae. A fracture was noted in any event where a vertebra demon-strated an interruption of bone structure.Item Supplemental Figure for "Genotype by heat stress interactions for production and functional traits in dairy cows from an across-generation perspective"(2021) Kipp, CordulaThe dataset includes supplementary figure S1 for the manuscript accepted for publication in the Journal of Dairy Science.Item Supplemental Material for "Effects of temperature-humidity index on blood metabolites of German dairy cows and their female calves"(2023) Halli, KathrinThe data tables are supplemental material for the research article "Effects of temperature-humidity index on blood metabolites of German dairy cows and their female calves". The aims of the present study were (a) to compare differences in blood plasma metabolite concentrations of German Holstein dairy cows either suffering from high mean THI (mTHI) on the day before blood sampling during late gestation or not suffering from high mTHI, and (b) to compare differences between blood plasma metabolite concentrations of their female calves either suffering from high mTHI on the day before blood sampling during the first week of life or not suffering from high mTHI. The supplementary data include 3 tables: Supplemental table S1: List of Metabolites: MxP® Quant 500 Kit (Biocrates Life Sciences AG, Innsbruck, Austria), Version: 2_02/2019 Supplemental table S2: Effects of fixed effects in the models 1a-c on metabolites of cows. The table includes log transformed Least-squares means (LSMeans) with corresponding SE, number of observations (n) and P-value. Supplemental table S3: Effects of fixed effects in models 2a-d on metabolites of calves. The table includes log transformed Least-squares means (LSMeans) with corresponding SE, number of observations (n) and P-value.Item Supplemental Material for "First DNA sequencing in Beninese Indigenous Cattle Breeds Captures New Milk Protein Variants"(2021-10) Vanvanhossou, Sèyi Fridaïus Ulrich; Giambra, Isabella Jasmin; Yin, Tong; Brügemann, Kerstin; Dossa, Luc Hippolyte; König, SvenThe data are supplementary materials for the research article "First DNA sequencing in Beninese Indigenous Cattle Breeds Captures New Milk Protein Variants". The aim of the study was to investigate polymorphisms in the milk protein genes CSN1S1, CSN2, CSN1S2, CSN3, LALBA, and LGB, and casein haplotypes in Beninese indigenous cattle. For this purpose, the exon sequences, flanking intron sequences and parts of the 5’-upstream regions of milk protein genes were sequenced in 67 Beninese indigenous cattle. Further details in the methodology and the main findings are provided in the article. The supplementary data include five tables: Table S1. Primer sequences utilized for the sequencing of the six milk protein genes (CSN1S1, CSN2, CSN1S2, CSN3, LALBA, LGB) in the Beninese indigenous cattle breeds; Table S2. List of the bovine miRNA and their corresponding seed sequences retrieved from the TargetScan website and used in “targetscan_60.pl” tool for the detection of miRNA target sites; Table S3. List of the polymorphisms detected within the exon sequences, flanking intron sequences and parts of the 5’-upstream regions of milk protein genes (CSN1S1, CSN2, CSN1S2, CSN3, LALBA, LGB) in Beninese indigenous cattle breeds; Table S4. Distributions of variant types (according to their positions and consequence) de-tected within each of the six milk protein genes (CSN1S1, CSN2, CSN1S2, CSN3, LALBA, LGB) and total in Beninese indigenous cattle breeds; Table S5. Functional consequence of the frameshift insertion of nucleotide A at BTA11:103257980 on the translational reading frame and on mature protein.