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dc.contributor.authorVanvanhossou, Sèyi Fridaïus Ulrich
dc.contributor.authorGiambra, Isabella Jasmin
dc.contributor.authorYin, Tong
dc.contributor.authorBrügemann, Kerstin
dc.contributor.authorDossa, Luc Hippolyte
dc.contributor.authorKönig, Sven
dc.date.accessioned2021-10-25T10:53:15Z
dc.date.available2021-10-25T10:53:15Z
dc.date.issued2021-10
dc.identifier.urihttps://jlupub.ub.uni-giessen.de//handle/jlupub/303
dc.identifier.urihttp://dx.doi.org/10.22029/jlupub-250
dc.description.abstractThe data are supplementary materials for the research article "First DNA sequencing in Beninese Indigenous Cattle Breeds Captures New Milk Protein Variants". The aim of the study was to investigate polymorphisms in the milk protein genes CSN1S1, CSN2, CSN1S2, CSN3, LALBA, and LGB, and casein haplotypes in Beninese indigenous cattle. For this purpose, the exon sequences, flanking intron sequences and parts of the 5’-upstream regions of milk protein genes were sequenced in 67 Beninese indigenous cattle. Further details in the methodology and the main findings are provided in the article. The supplementary data include five tables: Table S1. Primer sequences utilized for the sequencing of the six milk protein genes (CSN1S1, CSN2, CSN1S2, CSN3, LALBA, LGB) in the Beninese indigenous cattle breeds; Table S2. List of the bovine miRNA and their corresponding seed sequences retrieved from the TargetScan website and used in “targetscan_60.pl” tool for the detection of miRNA target sites; Table S3. List of the polymorphisms detected within the exon sequences, flanking intron sequences and parts of the 5’-upstream regions of milk protein genes (CSN1S1, CSN2, CSN1S2, CSN3, LALBA, LGB) in Beninese indigenous cattle breeds; Table S4. Distributions of variant types (according to their positions and consequence) de-tected within each of the six milk protein genes (CSN1S1, CSN2, CSN1S2, CSN3, LALBA, LGB) and total in Beninese indigenous cattle breeds; Table S5. Functional consequence of the frameshift insertion of nucleotide A at BTA11:103257980 on the translational reading frame and on mature protein.de_DE
dc.description.sponsorshipThis research was funded by the Volkswagen Stiftung, Hannover, Germany (grant Az 94 829). We acknowledge funding of S.F.U.V through the German Academic Exchange Service (DAAD) scholarship program: Research Grants—Doctoral Programmes in Germany.de_DE
dc.language.isodede_DE
dc.rightsNamensnennung - Nicht-kommerziell - Weitergabe unter gleichen Bedingungen 4.0 International*
dc.rights.urihttp://creativecommons.org/licenses/by-nc-sa/4.0/*
dc.subjectCasein and whey protein genes; genetic variants; casein haplotype; African taurine and indicine breeds; microRNA; transcription factor binding sitesde_DE
dc.subject.ddcddc:333.7de_DE
dc.subject.ddcddc:570de_DE
dc.subject.ddcddc:590de_DE
dc.subject.ddcddc:630de_DE
dc.titleSupplemental Material for "First DNA sequencing in Beninese Indigenous Cattle Breeds Captures New Milk Protein Variants"de_DE
dc.typeDatasetde_DE
local.affiliationAgrarwissenschaften und Umweltmanagementde_DE
local.embargo.noticeThe manuscript is currently under review. URL to the research article and required updated will be provided after publication.de_DE


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Namensnennung - Nicht-kommerziell - Weitergabe unter gleichen Bedingungen 4.0 International
Namensnennung - Nicht-kommerziell - Weitergabe unter gleichen Bedingungen 4.0 International