Code and Data for "S100Z is expressed in a lateral subpopulation of olfactory receptor neurons in the main olfactory system of Xenopus laevis"

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dc.contributorOffner, Thomas
dc.contributorTrendel, Alena
dc.contributorWeiss, Lukas
dc.contributorManzini, Ivan
dc.contributor.authorKahl, Melina
dc.contributor.authorHassenklöver, Thomas
dc.date.accessioned2024-02-06T08:15:49Z
dc.date.available2024-02-06T08:15:49Z
dc.date.issued2024-02-05
dc.description.abstractThis repository contains Python scripts that were used to analyze the distribution of manually identified cells in the olfactory system. Multiphoton microscopy image stacks of immunohistochemically labeled olfactory system tissue were manually annotated using the ImageJ ROI Manager tool. Regions of interest were exported from ImageJ as roi-files (provided as zip-archive). We include two datasets that were analyzed using these scripts. The datasets comprise of the imported ROI informations, experiment metadata, and results of calculations performed with the Python scripts. code.py: Script collection to analyze regions of interest drawn using the ImageJ ROI Manager tool. rois_from_imagej.zip: Roi-files exported from ImageJ. Subfolders contain s100z/biocytin labeled cells in different samples. biocytin_cell_counts.csv: Dataset of biocytin-backfilled olfactory receptor neurons s100z_cell_counts.csv: Dataset of human S100Z antibody labeled cellsde_DE
dc.description.sponsorshipDeutsche Forschungsgemeinschaft (DFG); ROR-ID:018mejw64de_DE
dc.identifier.urihttps://jlupub.ub.uni-giessen.de//handle/jlupub/18919
dc.identifier.urihttp://dx.doi.org/10.22029/jlupub-18280
dc.language.isoende_DE
dc.relationhttps://doi.org/10.1002/dneu.22935
dc.rightsAttribution-NonCommercial-ShareAlike 4.0 International*
dc.rights.urihttp://creativecommons.org/licenses/by-nc-sa/4.0/*
dc.subjectolfactionde_DE
dc.subjectvomeronasal organde_DE
dc.subjectamphibiande_DE
dc.subjectcalcium-binding proteinde_DE
dc.subjectlarvalde_DE
dc.subjecttadpolede_DE
dc.subjectfrogde_DE
dc.subject.ddcddc:570de_DE
dc.subject.ddcddc:590de_DE
dc.titleCode and Data for "S100Z is expressed in a lateral subpopulation of olfactory receptor neurons in the main olfactory system of Xenopus laevis"de_DE
dc.typeCollectionde_DE
local.affiliationFB 08 - Biologie und Chemiede_DE
local.project4113/4-1de_DE

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code.py
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8.51 KB
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Script collection to analyze regions of interest drawn using the imagej ROI Manager tool.
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biocytin_cell_counts.csv
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5.18 MB
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Dataset of biocytin-backfilled olfactory receptor neurons
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s100z_cell_counts.csv
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9.83 MB
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Dataset of human S100Z antibody labeled cells
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rois_from_imagej.zip
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9.58 MB
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ImageJ roi files
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